Endometriosis excision surgery is a surgical procedure performed to cut out the endometriotic lesions from the pelvic cavity and other locations. Unlike other endo surgeries that destroy the implant (ablation), excision aims to completely remove the lesion in entirety.
The benefits of excision surgery is it has potentially lower recurrence rate compared to ablation and has improved pain relief.
It can involve extensive dissection and need a skilled surgeon who is capable of identifying and removing all the lesions.

Other endometriosis surgery include ablation where the tissues are just burned on the surface without removing the actual lesion. So this lesion is still present. Patients may find initial relief in their symptoms but these symptoms come back as the lesions have not been removed. It does not need skilled surgeons and can be done by general OBGYN. When patients have endometriomas or chocolate cyst of the ovaries, they are usually drained but the cyst wall is left behind. Again since the disease portion has not been removed, they do come back.
Learn more about endometriosis excision surgery
Endometriosis most commonly affects organs within the pelvis (peritoneum, uterosacrals, ovaries) , though in rare cases it can spread beyond these areas and involve any where from lungs, diaphragm, small and large bowels, appendix, abdominal wall, bladder)
Frequently involved organs include the following:
Ovaries
Endometriosis can form cysts called endometriomas within the ovaries. These cysts can cause pain and disrupt ovarian function. In severe cases, an ovary may be partially removed if the endometrioma is large and deeply embedded, or if there’s significant damage to healthy ovarian tissue.
Fallopian tubes
Endometriosis implants can block or damage the fallopian tubes, hindering egg transport and potentially impacting fertility. During surgery, if the implant is on the surface, this will be removed to enable a complete excision procedure for the best outcome. Sometimes if the tube is diseased or dilated, recommendation is to remove the tube as diseased tube can affect the fertility.
Uterosacral ligaments
These ligaments support the uterus. Endometriosis implants here can cause pain during menstruation or intercourse. The surgeon might remove or excise parts of these ligaments if endometriosis has infiltrated them significantly.
Peritoneum
This is the lining of the pelvic cavity. Endometriosis implants here can cause inflammation and pain. The goal of surgery is to remove these implants.

Other organs (less common)
In rare instances, endometriosis can affect the bladder, bowels, or even the diaphragm. If endometriosis implants are found on these organs, the surgeon will attempt to remove them while minimizing damage to healthy tissue. When they are superficial, they can be peeled off from the surface minimizing damage to them. Sometimes a portion of them may need to be removed.
Appendix
It is part of the small bowel and is frequently involved. It is recommended to remove this if involved. Sometimes in young patients and especially someone with extensive endometriosis disease, the appendix should be removed even if it is normal looking.
Uterus
Sometimes especially if fertility is not the goal, in order to completely excise the disease, uterus removal may be necessary in bad adhesive disease involving the bowels and uterus, cervix.
It’s important to remember that the goal of surgery, particularly excision surgery, is meticulously cutting out the endometrial implants themselves, including their roots, while preserving as much healthy tissue as possible. This is why excision surgery is often preferred over ablation techniques that destroy the implants but might leave behind microscopic disease or damage surrounding tissues.
Learn more about endometriosis excision surgery at PRM
Any surgery has risks and benefits. Endometriosis surgeries are always geared for organ and nerve preservation and the decision to remove or partially remove a portion of an organ is driven by the goal of excising the disease completely to have the best benefit and outcomes.
Risks of incomplete surgery include persistence of pain and high recurrence rate. Other risks include decrease in ovarian reserve (for any endometrioma removal which can sometimes excise a healthy portion of ovaries), temporary change in bowel habits (after resection and re anastomosis of large bowel surgery), damage to hypogastric nerves (if nerves are entrapped in endometriosis). Removal of the appendix is well tolerated. Sometimes a portion of the vagina or bladder is also removed if the nodule is involving the vagina or the bladder. These are well tolerated. With bladder surgery you may be asked to have a temporary Foley catheter which drains the bladder.
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Here are some ways in which patients can prepare for the surgery.
Pre-surgical Discussions:
Emotional Preparation:
Recovery after endometriosis surgery can vary depending on the type of surgery performed, the extent of endometriosis removal, and your individual healing process.
Follow your doctor’s advice and don’t hesitate to reach out if you have any questions.